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BIO-INFORMATICS

Mitochondrial Bioinformatics

Mitochondria are a 'cell within a cell'. Their, relative to the complete cell, limited number of proteins, offer the opportunity to obtain, in the coming decade, an understanding of the processes that occur within them. Furthermore their evolutionary origin from a bacterium, the rapid accumulation of mitochondrial genomics data, and their relevance to human disease make them a very interesting subject for comparative analyses using bioinformatics techniques. We specifically focus on the prediction of the function of mitochondrial proteins and on the pathways that connect them. In the past we have e.g. correctly predicted a new protein involved in the oxidative phosphorylation Complex I and the involvement of the protein frataxin in the mitochondrial assembly of FeS clusters. Our current interests are into proteins involved in the response and defense against oxidative stress, in mitochondrial transport, in mitochondrial DNA maintenance and in the fission and fusion of mitochondria.

Contact
Martijn A. Huynen, Ph.D.
Center for Molecular and Biomolecular Informatics
Nijmegen Centre for Molecular Life Sciences
Radboud University Nijmegen Medical Centre
Toernooiveld 1
6525 ED Nijmegen
Netherlands
Tel. +31-(0)24-3653374
Fax. +31-(0)24-3652977
E-mail: M.Huynen@cmbi.kun.nl


Members
Philip Kensche
Isiah Sama
Vera van Noort
Fiona Nielsen
Bas Dutilh
Martin Oti
Guenola Ricard
Thijs Ettema

 

 

BIO-INFORMATICS